Welcome to OGeR
OGeR is an open source system for the storage, visualization and analysis of prokaryotic genome data. It provides a local or distributed data management solution for small and medium-sized sequencing projects.
OGeR was developed for the comparative analysis of several related bacterial genomes. It displays homologous proteins and compares adjacent intergenic regions. Homologous regions are displayed either as a map or as multiple alignments.
You can explore the functionalities of OGeR by browsing Strepto-DB, the database for comparative genome analyses of group A and group B streptococci.
You can download and run OGeR on your local linux operating system. OGeR imports the genomes of your choice in EMBL or GenBank format. The system stores genome sequences, gene/protein annotation and additional data in a relational database. You can query the database via webinterface. The system is implemented as a PostgreSQL database with an Apache/PHP frontend.
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